Insertion junction: LMJ.RY0402.219709_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.219709
Chromosome:chromosome 9
Location:3651668
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g390467 CGL66 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGCACATCTCATTGTTTACTTATCTTT
Internal bar code:GTGGACGAAAGTGTGGGCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:93.5428
LEAP-Seq n confirming:15631
LEAP-Seq n nonconfirming:1079
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTAACGTGGTCAAGGGA
Suggested primer 2:ATTTCCATCCCAGTGAGTGC