Insertion junction: LMJ.RY0402.219755_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.219755
Chromosome:chromosome 17
Location:863776
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g702400 PUS5 (1 of 1) 3.5.4.26//5.4.99.28 - Diaminohydroxyphosphoribosylaminopyrimidine deaminase // tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGCTCGATTGAGACCCCCTTCCCGCTC
Internal bar code:GCTTGACCCCAACGATAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:99.5215
LEAP-Seq n confirming:416
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGCCTTTCGTTCATC
Suggested primer 2:TTCTTACGGTACTGGCCCAC