Insertion junction: LMJ.RY0402.220014_5

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.220014
Chromosome:chromosome 17
Location:4254624
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g730550 (1 of 3) PTHR22298:SF39 - ENDOGLUCANASE 7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAATGCGGCGGAGCTTTGCACATATGGAC
Internal bar code:TGGGAATGTGGGGCCGTAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:99.3296
LEAP-Seq n confirming:1778
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCTGCCTTATTAGCGG
Suggested primer 2:GTTGACTGGTTTGCATGTGG