Insertion junction: LMJ.RY0402.220016_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.220016
Chromosome:chromosome 10
Location:2269152
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTACCATCCGGCCCTTCGCAAATCCT
Internal bar code:CGGGTGCAAGTGCATTTAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:99.7062
LEAP-Seq n confirming:1018
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCGTTGCTCTTGTGTA
Suggested primer 2:CATAGGGCTGAGTGATGGGT