Insertion junction: LMJ.RY0402.220019_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.220019
Chromosome:chromosome 2
Location:7578820
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g143801 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTATTATTCACGAGCCCGGTAACATGGT
Internal bar code:GTGTGCTATGGCAGCACGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:99.6127
LEAP-Seq n confirming:4372
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGTAGGTAGGTTGCGG
Suggested primer 2:TACGCCAAACCTACACCTCC