Insertion junction: LMJ.RY0402.220022_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.220022
Chromosome:chromosome 16
Location:3124109
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTACGTTCAGGGGAGTAGGGGCGTTTG
Internal bar code:GCACAGTGACGATCCGGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:99.5862
LEAP-Seq n confirming:2888
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGCCGTGTGTCCACAAAA
Suggested primer 2:CTTCGCCTACTAATGCCTGC