Insertion junction: LMJ.RY0402.220022_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.220022
Chromosome:chromosome 16
Location:3124387
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g665650 HFLX1,HFLX Putative chloroplast GTP-bidning protein involved in ribosome hibernation or ribosome biogenesis; (1 of 1) K03665 - GTP-binding protein HflX (hflX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGTCGGGTTGGCGACAGTGACACACGG
Internal bar code:ATATTCGTTTAACCCTAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:99.6853
LEAP-Seq n confirming:2851
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGAAGAGGAGTACTGGC
Suggested primer 2:TTGTGCGGGTGTGTACTTGT