Insertion junction: LMJ.RY0402.220206_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.220206
Chromosome:chromosome 5
Location:2669918
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g236525 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCCTCAGAATCTCAGATCTCTTTTTC
Internal bar code:CCTACGGTCACCCGGCGTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:99.5206
LEAP-Seq n confirming:1038
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAACCCCTAAACCCTAA
Suggested primer 2:GTCAGACCTGAGCGCATACA