Insertion junction: LMJ.RY0402.220206_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.220206
Chromosome:chromosome 5
Location:2669960
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g236525 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCACGTTTTTGTTGGTTTTGGTTTAGTT
Internal bar code:ACTCTACATAGAGAAATAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:420
LEAP-Seq percent confirming:99.0536
LEAP-Seq n confirming:314
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAAACAAGAGGGAGCAG
Suggested primer 2:GTCAGACCTGAGCGCATACA