Insertion junction: LMJ.RY0402.220436_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.220436
Chromosome:chromosome 9
Location:7840763
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g416700 Related to rhamnosyl methyltransferase; (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCATCGCCCGGACATAACCGGGGTCG
Internal bar code:GAGTTCTCGCGAGAATGGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:804
LEAP-Seq percent confirming:92.5067
LEAP-Seq n confirming:6901
LEAP-Seq n nonconfirming:559
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAATCTTGTGCAACAGC
Suggested primer 2:CAAAGGGAGAGGATGTTGGA