Insertion junction: LMJ.RY0402.220469_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.220469
Chromosome:chromosome 2
Location:1426823
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACACAGCCAGGAGTGCTTTGACGCGGC
Internal bar code:CTTGCGATGGAAGCCGGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:99.358
LEAP-Seq n confirming:22596
LEAP-Seq n nonconfirming:146
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGCATGATGGGAAAGA
Suggested primer 2:CTACACACATGCACCGCAC