Insertion junction: LMJ.RY0402.220644_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.220644
Chromosome:chromosome 9
Location:5050588
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g398326 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTGAGGGGAGTACTCCACGCCTGTGGC
Internal bar code:CCCCGGGCAAGGGACAGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:89.5042
LEAP-Seq n confirming:5398
LEAP-Seq n nonconfirming:633
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAGCAGGCACTGAGCTG
Suggested primer 2:AAGTGCATACGCCTGTACCC