Insertion junction: LMJ.RY0402.220667_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.220667
Chromosome:chromosome 6
Location:2790246
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g271150 FAP74,C1d-HC3 (1 of 6) PF14874 - Flagellar-associated PapD-like (PapD-like); Flagellar Associated Protein 74 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGCAAAAGAGCGGGGGATGGGGGGTG
Internal bar code:GGCTCAGCCGTGAGTAACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:99.8468
LEAP-Seq n confirming:5864
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTACATAACGCGTGGA
Suggested primer 2:GTTTGCTGTGGACTTGAGCA