Insertion junction: LMJ.RY0402.220896_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.220896
Chromosome:chromosome 16
Location:2695515
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g662350 TSPS1,TPS2 (1 of 3) 2.4.1.15 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase; Trehalose-6-phosphate synthase, class I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTGCAGTTAAGGCCGAGGCCGAATCCC
Internal bar code:TCGCGCCCTAGGAAAAGGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:94.3414
LEAP-Seq n confirming:3918
LEAP-Seq n nonconfirming:235
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAAGCGTTTGTGTTTGC
Suggested primer 2:GCCGTAGCTCTCATAGTGGC