Insertion junction: LMJ.RY0402.221150_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.221150
Chromosome:chromosome 17
Location:6007376
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g740700 FAP336 (1 of 7) PF05517 - p25-alpha (p25-alpha); P25 Alpha Domain Containing Flagellar Associated Protein 336 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGCTAGCCATGCTCGCCAGCCTCAT
Internal bar code:GACTTGGCGTATATACGATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:673
LEAP-Seq percent confirming:81.0196
LEAP-Seq n confirming:13890
LEAP-Seq n nonconfirming:3254
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TATCACTCAGGAGGATCGGG
Suggested primer 2:TGCTGGTGTCTCAAAAGTGC