Insertion junction: LMJ.RY0402.221255_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.221255
Chromosome:chromosome 12
Location:4729536
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g523700 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGATTTGCTCATGCGGCGTGCCAAGCCC
Internal bar code:TCAAACGAACAATTCTCGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1132
LEAP-Seq percent confirming:97.3733
LEAP-Seq n confirming:10602
LEAP-Seq n nonconfirming:286
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTCGCTCGTCTTCTAC
Suggested primer 2:CTGGGTCGGTCGTCAACTAT