Insertion junction: LMJ.RY0402.221300_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.221300
Chromosome:chromosome 7
Location:824020
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g318350 CGL64 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATATAGCTGTGTACGTACGGCTGTGTT
Internal bar code:TTACATTATTGCCGCGGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1082
LEAP-Seq percent confirming:99.4221
LEAP-Seq n confirming:12215
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCAATTGAACTCTTGAA
Suggested primer 2:CATGGTTGGTGGTAGTGCTG