Insertion junction: LMJ.RY0402.221478_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.221478
Chromosome:chromosome 5
Location:249184
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCCATCGCCCCTGGCCTCAGCCGCATC
Internal bar code:GGGTCCCAACGCAGTCTCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:47.5
LEAP-Seq n confirming:171
LEAP-Seq n nonconfirming:189
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTCGAGCATCTTCTTT
Suggested primer 2:TACAAGTGAGGCGATGTTGG