Insertion junction: LMJ.RY0402.221561_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.221561
Chromosome:chromosome 3
Location:4841629
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g179000 RAA16 component psaA trans-splicing sub complex II 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATAAGAGCTTCAGCCATGCTGCCGTGC
Internal bar code:CTTCGGCTCTCCCCCCCGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:97.9068
LEAP-Seq n confirming:4537
LEAP-Seq n nonconfirming:97
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGTGCTGCCAAGTCGTA
Suggested primer 2:GGGTAGCTCGCTATTCGTTG