Insertion junction: LMJ.RY0402.221839_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.221839
Chromosome:chromosome 17
Location:1489917
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g707050 UAF5,SPL12 U2 snRNP auxiliary factor associated protein; (1 of 1) K13093 - HIV Tat-specific factor 1 (HTATSF1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTATGGAAACCCTCTTGCTTTGACTTTC
Internal bar code:ATTCTTACCCTACGCGCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:632
LEAP-Seq percent confirming:99.6586
LEAP-Seq n confirming:3211
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCGTGACAACTGGCTGA
Suggested primer 2:ATTCTCACAACGCTGCCTCT