Insertion junction: LMJ.RY0402.221862_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.221862
Chromosome:chromosome 3
Location:3725293
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g169550 AOX2 Alternative oxidase; (1 of 2) PTHR31803:SF3 - ALTERNATIVE OXIDASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATCAATTGCGCAGACCGCCAGGTGTG
Internal bar code:AGGCCCCCCTCGTCTTTGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCATACAGCAGGAAGA
Suggested primer 2:AAATAAAGGTGCGTGGATGC