Insertion junction: LMJ.RY0402.221921_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.221921
Chromosome:chromosome 6
Location:8501088
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTGTATACCATGACAGCCGCGTGTGT
Internal bar code:GAGGAGAGTGGTTTGGGCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:497
LEAP-Seq percent confirming:97.402
LEAP-Seq n confirming:2137
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCTGCCGAGGACTTCAA
Suggested primer 2:GAGACAGATGGAAGCAAGCC