Insertion junction: LMJ.RY0402.221967_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.221967
Chromosome:chromosome 4
Location:1878177
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAATTATCCCAAACCGCGCATCGCGC
Internal bar code:GGAGGAGCACGCGCCGGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:79.3234
LEAP-Seq n confirming:4807
LEAP-Seq n nonconfirming:1253
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGATAAGGTCCTGCC
Suggested primer 2:TTTGGTTTAGTTTGGGCTGG