Insertion junction: LMJ.RY0402.222066_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.222066
Chromosome:chromosome 3
Location:7969383
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCGGCTCGTGGGTGTGGATGTGGCATT
Internal bar code:TCTAGTGCTTTCATGCCACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:452
LEAP-Seq percent confirming:98.008
LEAP-Seq n confirming:246
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGACTCTGTTCTTGAAGG
Suggested primer 2:CAGACCCATGTTGTGACCTG