Insertion junction: LMJ.RY0402.222229_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.222229
Chromosome:chromosome 9
Location:6362140
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGGTGGGGCCATCACGCTGTCCAAGCG
Internal bar code:GGGCTGTATGACCGGCCTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:87.8196
LEAP-Seq n confirming:21435
LEAP-Seq n nonconfirming:2973
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGTACACGCAGGCACAG
Suggested primer 2:GGACTGCTTCTGCTTCTGCT