Insertion junction: LMJ.RY0402.222230_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222230
Chromosome:chromosome 11
Location:1584534
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCAGGACACGCGTGTCAAACCCCCGT
Internal bar code:GATCTACCGGGACCGCACATT

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:99.6583
LEAP-Seq n confirming:4958
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGGGGGATAGCACTGT
Suggested primer 2:TCGTTGCCACTCAAGTTACG