Insertion junction: LMJ.RY0402.222309_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222309
Chromosome:chromosome 1
Location:2648015
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTATTTACCACTCCTCACCCGTATCGCC
Internal bar code:TTGGCGGTGCAATTCTAAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:99.6814
LEAP-Seq n confirming:3442
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCTTCCACCCTGTCTT
Suggested primer 2:GACAGACGGATGATGGTGTG