Insertion junction: LMJ.RY0402.222450_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222450
Chromosome:chromosome 13
Location:1406539
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g572000 TPM1,UPM2,SUMT2,COBA Putative tetrapyrrole methylase; (1 of 1) 2.1.1.198 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTTGGTGGTGTTGCTCCGAGCTACAG
Internal bar code:AGGCCAGATCCCGTTCTATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:98.4698
LEAP-Seq n confirming:13449
LEAP-Seq n nonconfirming:209
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCATGAGACCAGGAGCTG
Suggested primer 2:TGCTTGTCAGGCTAGGGACT