Insertion junction: LMJ.RY0402.222456_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222456
Chromosome:chromosome 6
Location:3861175
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278176 (1 of 1) PTHR22847//PTHR22847:SF500 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCAGGATGAGGCAGCAAGTGTGCATCCC
Internal bar code:TTACTTATTCCTGCTATTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:96.8391
LEAP-Seq n confirming:1011
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGAGCTGTGTGATGT
Suggested primer 2:CCATGCTGTGCTCACCTAGA