Insertion junction: LMJ.RY0402.222604_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.222604
Chromosome:chromosome 9
Location:4678938
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396809 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATATGTGCACCGTGTGCCTGTTACTGCG
Internal bar code:GCGCGCACGGTTTATCACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:98.991
LEAP-Seq n confirming:2649
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGGATTTGTCCGTGTGG
Suggested primer 2:ACGGTGGTTTGAGGTAGTGC