Insertion junction: LMJ.RY0402.222684_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.222684
Chromosome:chromosome 3
Location:508777
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g145227 (1 of 1) K12199 - vacuolar protein sorting-associated protein VTA1 (VTA1, LIP5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAGAGAGCGCAGGAGATTCAGGCAGCC
Internal bar code:GGTAAATATTCAAGAAAGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:99.6365
LEAP-Seq n confirming:6304
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGGTTCGCTCAAAGTC
Suggested primer 2:TCTCCAGCTGGTTGAGTGTG