Insertion junction: LMJ.RY0402.222721_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222721
Chromosome:chromosome 3
Location:5137246
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g181950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAACAATTGTCGGTGGGTTGCCGTACC
Internal bar code:CGGGCGGGCCGCGTCCCTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1171
LEAP-Seq percent confirming:95.4725
LEAP-Seq n confirming:9911
LEAP-Seq n nonconfirming:470
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGAAAGGCCAGCATAGC
Suggested primer 2:CCTCGCTGGTGAGTAAAAGC