Insertion junction: LMJ.RY0402.222776_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.222776
Chromosome:chromosome 7
Location:3345347
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g334900 (1 of 3) IPR004089 - Methyl-accepting chemotaxis protein (MCP) signalling domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATGATCAGATGCGGCCCCGGCCAAGAC
Internal bar code:CAAAGTGCGGATTAACGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:99.2029
LEAP-Seq n confirming:1369
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGAGGCGGACAAGGTAA
Suggested primer 2:GCCTGACCCTGTACCCTGTA