Insertion junction: LMJ.RY0402.222790_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.222790
Chromosome:chromosome 6
Location:2363747
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g267600 LCYE,LEC1,LCYE1 (1 of 1) 5.5.1.18 - Lycopene epsilon-cyclase; lycopene epsilon cyclase, chloroplast precursor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACGGGCACCAAGTGCAGAAGGGCCCG
Internal bar code:CCTGAGAAGTCCGTAAAATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:98.1726
LEAP-Seq n confirming:967
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGTGTGTGTGTGTGT
Suggested primer 2:ATGGTTTGGGCAGCTTACAC