Insertion junction: LMJ.RY0402.222849_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.222849
Chromosome:chromosome 11
Location:2724723
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCGACGCTCCTCTGCGGCAAAGTCGTT
Internal bar code:CTGGGTCGCGTGTCGTATGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:365
LEAP-Seq percent confirming:99.5774
LEAP-Seq n confirming:9425
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTCGGTTTAATTTGGGT
Suggested primer 2:CTCTCCCGTCAGGACTTTTG