Insertion junction: LMJ.RY0402.222926_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222926
Chromosome:chromosome 3
Location:2267300
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTTCTTGCATTGGTAGTCGCCGGTTA
Internal bar code:TATTTTAGACGGCGGCTAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:99.7204
LEAP-Seq n confirming:3567
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCGACATACCAGGTTA
Suggested primer 2:CAAAATAGCCTTGCCTCTGC