Insertion junction: LMJ.RY0402.222926_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.222926
Chromosome:chromosome 3
Location:2267314
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCCAGTGCAATGCCCGCCGCCATGCC
Internal bar code:CAGGCATGTGGGGGGTCCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:77.5934
LEAP-Seq n confirming:187
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCGACATACCAGGTTA
Suggested primer 2:CAAAATAGCCTTGCCTCTGC