Insertion junction: LMJ.RY0402.222930_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.222930
Chromosome:chromosome 5
Location:2162148
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g234645 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAAGAACCATGTCACCGCGCGCGTGGGG
Internal bar code:CGTCATGCCTAGTTGGCGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:98.3716
LEAP-Seq n confirming:3685
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGCTATTCCACTTCAA
Suggested primer 2:AGCAGCGGTTCTGTGAGTTC