Insertion junction: LMJ.RY0402.223060_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.223060
Chromosome:chromosome 9
Location:2022558
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCTGGGTGAGCAAACGCGAGGATGCGC
Internal bar code:GGCGTAGACGGTTTTTAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:846
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTGAAGCACACATTCA
Suggested primer 2:TTTGGGTACAACAGCCAACA