Insertion junction: LMJ.RY0402.223207_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223207
Chromosome:chromosome 1
Location:1783016
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGAGGAGAGGCGTGGTTTGGGCTGTT
Internal bar code:TGAGCACAGCCGAGTCACACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:98.2659
LEAP-Seq n confirming:340
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGAGGACGAGGAGGAG
Suggested primer 2:AATAGGACTGGGGCTGTGTG