Insertion junction: LMJ.RY0402.223380_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.223380
Chromosome:chromosome 12
Location:5609017
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g532050 (1 of 1) PF00069//PF04564//PF07714//PF12796 - Protein kinase domain (Pkinase) // U-box domain (U-box) // Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACACAATATACCCAGGACGTGTCCGCAC
Internal bar code:TTGTTCGGTCACCGCAAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:99.6851
LEAP-Seq n confirming:2216
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGTATGGTGATGGGGT
Suggested primer 2:TTCAATGAATTCCCAGCACA