Insertion junction: LMJ.RY0402.223443_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223443
Chromosome:chromosome 3
Location:7489191
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGTGCAGTGCTGCGGCTCTAGATGGCG
Internal bar code:AGGCCTACTGCGCCCGCGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:99.8131
LEAP-Seq n confirming:534
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGGAAGGTGGTTATTGG
Suggested primer 2:CCAGCGCTATGCTATGAACA