Insertion junction: LMJ.RY0402.223482_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.223482
Chromosome:chromosome 16
Location:1569111
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g653700 (1 of 1) PTHR10972//PTHR10972:SF71 - OXYSTEROL-BINDING PROTEIN-RELATED // OXYSTEROL-BINDING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGGCAGCTCGCCCCAGGCCTTCTTCT
Internal bar code:GGTAAGCCCTCGGTTTTGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:96.3318
LEAP-Seq n confirming:1707
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGCTTCATTATGTTGTT
Suggested primer 2:TTGTGTGCAGAGTCTGGAGG