Insertion junction: LMJ.RY0402.223554_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.223554
Chromosome:chromosome 5
Location:1425865
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g244150 (1 of 1) IPR002073//IPR020683 - 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCAGGGCACGTTCAAGGCCGCAGGCGA
Internal bar code:ACCACCGCACAGCTGCCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:64.6766
LEAP-Seq n confirming:650
LEAP-Seq n nonconfirming:355
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTCTCTCCACGTTGTC
Suggested primer 2:TGCAAATGGAAAGTGGTTCA