Insertion junction: LMJ.RY0402.223679_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223679
Chromosome:chromosome 9
Location:5548945
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g400627 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAGCTAGCCTCCACACCGGGGAATCCA
Internal bar code:CAGCCGGTTCTCGGTACAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:98.5017
LEAP-Seq n confirming:1775
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGCTAAACCCTCCATC
Suggested primer 2:GCGGGAGTGTATCCACTGAT