Insertion junction: LMJ.RY0402.223694_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.223694
Chromosome:chromosome 16
Location:559585
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGCGGCATGAGTGCAGCGCTGACG
Internal bar code:CGTTACGGAGTGGCGTGATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:682
LEAP-Seq percent confirming:77.8066
LEAP-Seq n confirming:7797
LEAP-Seq n nonconfirming:2224
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCCGCTAGACAACTTT
Suggested primer 2:CCTCCCATTCGACTCCTACA