Insertion junction: LMJ.RY0402.223705_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.223705
Chromosome:chromosome 9
Location:3098011
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g386850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGGAAGCGATGGGCCGGATGCTGACC
Internal bar code:AATACTCCGACTAACATGGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:47.8389
LEAP-Seq n confirming:487
LEAP-Seq n nonconfirming:531
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTTGTGCCTGTTGTGCT
Suggested primer 2:ATGTTATCTCGGTCGGTTGC