Insertion junction: LMJ.RY0402.223872_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223872
Chromosome:chromosome 12
Location:8371664
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g549150 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGCGCCACCCAGCAGGTTGTGGTTGA
Internal bar code:CCGCTCCGGGGTACGGATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:86.3134
LEAP-Seq n confirming:1873
LEAP-Seq n nonconfirming:297
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCAAGAGGTTGCAAAG
Suggested primer 2:TGTTTCGTCCTGCTCATCTG