Insertion junction: LMJ.RY0402.223890_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.223890
Chromosome:chromosome 1
Location:3890495
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g025350 FAP235 (1 of 3) PF03703 - Bacterial PH domain (bPH_2); Flagellar Associated Protein 235 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTAAGCCGTCCACAGTACCCCTGGGA
Internal bar code:ATCGCGATTTGCAGTACGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:99.3976
LEAP-Seq n confirming:660
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGCGATGCTCACATGAA
Suggested primer 2:CTGAGCCTGAGAAGGTGAGG