Insertion junction: LMJ.RY0402.223941_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.223941
Chromosome:chromosome 8
Location:3388301
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g374350 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACAACCGTAGCAGGATATGGGCATGGG
Internal bar code:CAAGACGCACCGGGACGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:759
LEAP-Seq percent confirming:98.9592
LEAP-Seq n confirming:3613
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGGGTTCTGCAATACTT
Suggested primer 2:GGGACTGCCACCGTAGTTTA